MicroscopesBlog: Expert's reviews, news, notes on Microscopes, Centrifuges, Lab Coats, Pipettes, Lab Safety, & more Lab Products!
Friday, May 29, 2009
Cell Culture
Why is it that so many people are performing cell culture in their laboratories? Cell culture has many applications. Vaccines for polio, measles, chicken pox, and rubella are made in cell cultures. Cell culture can be used to reproduce a large number of cells of interest. After these cells have been harvested in cell culture media their various structures can be immunostained and viewed under a flourescent or confocal microscope. Cell culture protocol involves the isolation of cells from their natural environment and growing them in cell culture flasks while suspended in cell culture media. These cell culture flasks are placed in a CO2 incubator at 37 degrees celsius and at 5% CO2. Cell culture methods may vary depending on the cell type. Cell culture contamination occurs quite often due to the sensitivity of cell culture techniques. Nalge Nunc, Mediatech, and Corning all make products used in cell culture. Mammalian cell culture has a wide range of applications and is performed by scientists around the world.
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Monday, May 25, 2009
Setting Up A New Laboratory?
Often when we think about setting up a new lab, we think about all the laboratory items that are used inside the lab. Such as, beakers, gloves, centrifuge tubes, test tubes, wipes, safety glasses, lab coats, face masks, etc..However; we need to start with the lab first. What style of laboratory are you looking for? You will need to begin to look for laboratory furniture before you start with all the fun things we listed above. Things like cabinets, a work surface, cupboards, and storage drawers. Are you going to want double doors, or single doors? Do you want steel or wood? What color are you interested in? My what choices you have to make. Work Top material selections are among the most critical of the laboratory furniture decisions. The intended applications for your work tops dictate material choice. I can help make it better. Have you ever heard of Kewaunee Laboratory furniture? Kewaunee makes selecting laboratory furniture easy. Kewaunee can recommend and furnish materials fabricated to your individual needs, complete with appropriate sinks, drains and accessories.Friday, May 22, 2009
PCR
Ever wonder what those actors and actresses on the hit show CSI are doing in the laboratory with the DNA they find? One of the first steps in using DNA to solve crimes is to perform the polymerase chain reaction otherwise known as PCR. Polymerase chain reaction or PCR is a laboratory technique used to amplify a piece of DNA. The double stranded DNA is denatured by using heat. A pcr primer complemetary to the single strand of DNA is then used as the starting piont of the replicated piece of DNA. PCR primers along with an enzyme known as taq polymerase are essential for the amplification process. Taq polymerase then uses nucleotides in solution to create the new strand of DNA. The pcr product is a solution of millions of copies of the original DNA sequence. PCR is a very sensitive technique making it imperative to follow the pcr protocol. There are variations of PCR such as quantitative pcr. Quantitaive PCR is used to measure the quantity of pcr product produced. Quantitative pcr is sometimes abbreviated as qrt-pcr (short for quantitative real-time pcr) however this is incorrect and is often confused with RT-PCR or reverse transcriptase pcr. Companies like Promega, Labnet, and Labconco supply products used in the polymerase chain reaction.
Monday, May 18, 2009
Summer, time for tubes, Centrifuge Tubes!
There are many different types of centrifuge tubes. Depending what sample you are spinning and what centrifuge you are using will be dependent on what type of centrifuge tubes you will need. I am going to help you determine what tubes are best suited for you. There are glass tubes, plastic, round bottom, conical bottom, and flat bottom tubes. The two most common sizes are 15ml tubes and 50ml tubes. For a DNA application you will want to use PCR tubes. Conical bottom glass tubes allow for maximizing sample recovery. Conical bottom tubes meet bioanalytical-grade requirements and provide unsurpassed performance in critical research applications. Round bottom tubes are widely used in the laboratory, they are also widely referenced in published procedures and protocols. Most types of centrifuge tubes are offered in glass, polystyrene, polypropylene, with screw caps or snap caps which makes handling easy. Polypropylene tubes are best suited for applications requiring greater thermal and chemical stability. Polystyrene tubes are best suited for procedures requiring high optical clarity. Dual-position snap caps, heavier gauge walls, and unique construction provide a secure, positive seal.Friday, May 15, 2009
Proteins
What is a protein? Most people would say that proteins are required for strength and muscle building. While this is true proteins have a structural purpose as well a functional one. Proteins speed up chemical reactions, fight bacteria, tranpsort substances such as oxygen, and they build other proteins to name a few of their functions. A protein is a compound made up of amino acids arranged in a linear chain. This is known as primary structure. The amino acids interact with each other via hydrogen bonding to form secondary structure. Tertiary structure is the overall shape of the protein molecule which involves the spatial relationship of the alpha helix and the beta sheet. The next level of protein structure is quaternary structure which refers to the interaction of multiple protein subunits. Many physiological responses are the result of protein interaction such as insulin binding to its receptor in the cell membrane. Serum proteins are proteins that exist in the plasma portion of blood. Immunoglobulin G is a serum protein involved in the response of the immune system to allergens. Researchers perform what's called a protein assay to dermine protein concentrations of fluids like blood. Once the protein concentration has been determined doctors can more accurately diagnose a patient. Protein electrophoresis or gel electrophoresis is used to identify proteins by comparing samples to standards of known molecular weight. Promega and BD are well known for their protein reagents and assays.Thursday, May 14, 2009
Tips on Pipette Tips
There are many styles of micropipette tips available to the researcher. There are gel loading tips which are meant for loading samples on to electrophoresis gels. Aerosol barrier filter pipette tips are used for protecting the micropipettor from the volatile components of the sample. Pyrogen free/RNase/DNase free tips are used in DNA research. Positive displacement pipette tips are for sticky or viscous fluids. Typical pipette volume ranges are: 0.5-20ul, 2-200ul, 50-1000ul, and 1ml -5ml. Micropipette manufacturers such as Axygen, Thermo (Finntip), Eppendorf, and Labnet supply ul pipette tips specific for their brand. There are scientific suppliers such as Labcon and Brandtech who manufacture their tips to fit many brands of pipettors.Monday, May 11, 2009
Types of Centrifuges
There are at least five types ofcentrifuges. Preparative , analytical, fixed angle, swing head, and haemacrotic centrifuges. Industrial centrifuges may be classified according to the type of separation of the high density fraction from the low density one. Simple centrifuges are used in chemistry, biology, and biochemistry for isolating and separating suspensions. Each one will vary widely in speed and accuracy. Centrifuges are made up of a rotor, containing two, four, six or many more numbered wells, and adapters within which the samples containing centrifuge tubes may be placed.Friday, May 08, 2009
Immersion Circulators
What is an immersion circulator? An immersion circulator is an apparatus that can be clamped to a water bath or suspended above a water bath that will raise the temperature of the liquid and circulate it at the same time. An immersion circulator can be used to temper a wide variety of samples, prepare media, incubate cultures, and thaw specimens. Polyscience Corporation is well known for their immersion circulators as well as other products used in life science applications. Depending on the model one may increase the temperature of their liquid from 5 degrees above ambient temperature to 150 degrees celsius. Immersion circulators can be used for any application where a constant temperature is required. Immersion circulators are even being used for cooking! Accessories such as cooling coils, high temperature tubing, clear bath algicide, and heat transfer fluid are available to accommodate a variety of applications and laboratory techniques.
Monday, May 04, 2009
Rate-Zonal & Isopycnic Centrifugation
The density of the particles being separated are greater than the density of the solvent. Separation is based on Mass. For example larger particles will sediment faster. Sedimentation is the tendency for particles in suspension or molecules in a solution to settle out of the fluid in which they are entrained and come to rest against a wall. Isopycnic Centrifugation is when solvent density encompasses density of particles. The separation is based upon particle density.
Friday, May 01, 2009
Enzymes
What do laundry detergent, biological weapons, beer, contact lens solution, solving the O.J. Simpson murder trial and digestion all have in common? They all involve and depend on the work of enzymes. An enzyme, in most cases, is a protein that catalyzes or increases the rate of a chemical reaction. How does this work? The biochemistry behind enzymatic activity is complex but to put it simply, an enzyme creates a different environment in which a chemical reaction takes place. The chemical reaction takes place in a region of the protein known as the active site. In this active site the enzyme binds to a substrate and can alter the ph and form bonds with the substrate in order to produce products. Enzymes play an important role in molecular biology (the area of biology that focuses on the interaction of DNA, RNA and protein synthesis). Restriction enzymes, also referred to as DNA enzymes, slice DNA in a specific location. This allows forensic scientists to compare blood left at crime scenes with the blood of suspects. Companies like Promega and Mediatech provide enzymes and reagents used in molecular biology laboratory techniques. Industrial enzymes are used in processes such as the brewing of beer and food processing. Some nerve agents used by the military include an inhibitor that ceases the activity of certain enzymes. Enzymes are used in a wide range of applications and have changed the way we produce products and fight enemies.
